Detailed information of matrix profile MA1168.1

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Profile summary
Name: MYR2
Matrix ID: MA1168.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9SQQ9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 257 315 206 262 0 586 596 0 288 13 85 108 110 146 ]
C [ 84 33 62 97 0 10 0 0 310 0 20 241 131 96 ]
G [ 115 103 174 239 597 0 0 0 0 0 55 33 102 131 ]
T [ 142 147 156 0 1 2 2 598 0 585 438 216 255 225 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1168.1 MA1168 1 MYR2 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1168.2 MA1168 2 MYR2 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0256.1

ChIP-seq Centrality
-log(P-value): 26703.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0256.1

ChIP-seq Centrality
-log(P-value): 25941.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: