Detailed information of matrix profile MA1210.2

  1. Home
  2. Matrix > MA1210.2

Profile summary
Name: HAT22
Matrix ID: MA1210.2
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8253077
Uniprot ID: P46604  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1030 927 215 3035 3137 48 322 3123 58 88 298 987 1011 ]
C [ 607 761 2650 78 18 26 309 15 6 21 86 488 543 ]
G [ 459 406 92 20 9 14 309 23 25 41 2470 791 540 ]
T [ 1120 1122 259 83 52 3128 2276 55 3127 3066 362 950 1122 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1210.1 MA1210 1 HAT22 Arabidopsis thaliana
HD-ZIP Homeo domain factors
MA1210.2 MA1210 2 HAT22 Arabidopsis thaliana
HD-ZIP Homeo domain factors
MA1210.3 MA1210 3 HAT22 Arabidopsis thaliana
HD-ZIP Homeo domain factors
     

-log(P-value) = 160.432

TFFM details

TFFM ID: TFFM0834.1

ChIP-seq Centrality
-log(P-value): 1783.52

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0834.1

ChIP-seq Centrality
-log(P-value): 1701.49

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: