Detailed information of matrix profile MA1213.2

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Profile summary
Name: ZHD3
Matrix ID: MA1213.2
Class: Homeo domain factors
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11247607 11247607
Uniprot ID: O64722  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2877 2259 705 7125 7415 31 1160 7442 39 129 897 2341 2244 ]
C [ 1041 1751 5659 133 23 19 247 7 11 30 148 824 1209 ]
G [ 1101 784 189 26 5 8 247 14 29 67 5524 1964 943 ]
T [ 2478 2703 944 213 54 7439 5843 34 7418 7271 928 2368 3101 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1213.1 MA1213 1 ATHB-21 Arabidopsis thaliana
HD-ZIP::PLINC Homeo domain factors::Homeo domain factors
MA1213.2 MA1213 2 ZHD3 Arabidopsis thaliana
PLINC Homeo domain factors
MA1213.3 MA1213 3 ZHD3 Arabidopsis thaliana
PLINC Homeo domain factors
     

-log(P-value) = 5160.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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