Detailed information of matrix profile MA1257.2

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Profile summary
Name: ERF9
Matrix ID: MA1257.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9756931
Uniprot ID: Q9FE67  
Source: 27203113
Comment: Also known as ERF080

Sequence logo

Frequency matrix

         
A [ 89 109 106 83 106 143 104 161 111 73 167 26 0 10 16 4 31 204 52 ]
C [ 24 50 265 32 63 239 32 37 167 6 15 496 0 0 493 0 34 253 8 ]
G [ 353 336 69 343 333 39 269 270 17 383 360 0 551 544 0 514 483 6 439 ]
T [ 89 60 115 97 53 134 150 87 260 93 13 33 4 1 46 37 7 92 56 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1257.1 MA1257 1 ERF9 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1257.2 MA1257 2 ERF9 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: