Detailed information of matrix profile MA1270.2

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Profile summary
Name: DOF3.2
Matrix ID: MA1270.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9M1E6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 327 328 397 363 267 153 120 496 465 600 599 600 0 58 285 323 ]
C [ 55 48 59 56 57 107 176 10 0 0 1 0 0 85 27 51 ]
G [ 92 120 55 98 189 211 175 55 0 0 0 0 600 138 111 151 ]
T [ 126 104 89 83 87 129 129 39 135 0 0 0 0 319 177 75 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1270.1 MA1270 1 DOF3.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1270.2 MA1270 2 DOF3.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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