Detailed information of matrix profile MA1289.1

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Profile summary
Name: TCP3
Matrix ID: MA1289.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12000681
Uniprot ID: Q9MAH8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 208 162 14 0 0 0 28 0 0 15 250 288 139 ]
C [ 104 51 6 38 0 0 0 582 582 563 185 77 209 ]
G [ 74 154 561 0 582 582 51 0 0 2 89 95 69 ]
T [ 196 215 1 544 0 0 503 0 0 2 58 122 165 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1289.1 MA1289 1 TCP3 Arabidopsis thaliana
TCP Basic helix-loop-helix factors (bHLH)
MA1289.2 MA1289 2 TCP3 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0397.1

ChIP-seq Centrality
-log(P-value): 4623.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0397.1

ChIP-seq Centrality
-log(P-value): 4641.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: