Detailed information of matrix profile MA1289.1

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Profile summary
Name: TCP3
Matrix ID: MA1289.1
Class: Basic helix-loop-helix factors (bHLH)
Family: TCP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12000681
Uniprot ID: Q9MAH8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 165 122 58 2 0 0 503 0 0 544 1 215 196 ]
C [ 69 95 89 2 0 0 51 582 582 0 561 154 74 ]
G [ 209 77 185 563 582 582 0 0 0 38 6 51 104 ]
T [ 139 288 250 15 0 0 28 0 0 0 14 162 208 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1289.1 MA1289 1 TCP3 Arabidopsis thaliana
TCP Basic helix-loop-helix factors (bHLH)
MA1289.2 MA1289 2 TCP3 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0397.1

ChIP-seq Centrality
-log(P-value): 4623.46

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0397.1

ChIP-seq Centrality
-log(P-value): 4641.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: