Detailed information of matrix profile MA1343.1

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Profile summary
Name: BZIP52
Matrix ID: MA1343.1
Class: Basic leucine zipper factors (bZIP)
Family: Group I
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q8VWG0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 174 143 244 151 218 397 32 0 0 0 0 51 434 215 ]
C [ 76 65 139 332 242 4 85 598 0 0 0 548 46 109 ]
G [ 102 204 118 0 78 198 479 0 0 599 290 0 68 68 ]
T [ 247 187 98 116 61 0 3 1 599 0 309 0 51 207 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1343.1 MA1343 1 BZIP52 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
MA1343.2 MA1343 2 BZIP52 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0309.1

ChIP-seq Centrality
-log(P-value): 14894.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0309.1

ChIP-seq Centrality
-log(P-value): 14927.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: