Detailed information of matrix profile MA1362.1

  1. Home
  2. Matrix > MA1362.1

Profile summary
Name: bHLH77
Matrix ID: MA1362.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q9LK48  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 27 11 0 75 0 6 0 0 30 15 19 30 25 22 7 ]
C [ 28 0 75 0 75 0 1 0 22 40 22 10 32 12 35 ]
G [ 10 36 0 0 0 69 0 75 23 7 13 4 2 13 12 ]
T [ 10 28 0 0 0 0 74 0 0 13 21 31 16 28 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1362.1 MA1362 1 bHLH77 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1362.2 MA1362 2 bHLH77 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: