Detailed information of matrix profile MA1392.2

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Profile summary
Name: MYB98
Matrix ID: MA1392.2
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497 25215497
Uniprot ID: Q9S7L2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 425 307 529 9 11 6 5 1004 0 407 377 ]
C [ 76 30 378 991 5 1 4 4 1015 117 95 ]
G [ 189 178 83 3 1000 1 6 3 2 182 156 ]
T [ 329 504 29 16 3 1011 1004 8 2 313 391 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1392.1 MA1392 1 MYB98 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1392.2 MA1392 2 MYB98 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA1392.3 MA1392 3 MYB98 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 916.0

TFFM details

TFFM ID: TFFM0850.1

ChIP-seq Centrality
-log(P-value): 1032.06

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0850.1

ChIP-seq Centrality
-log(P-value): 1073.38

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: