Detailed information of matrix profile MA1528.2

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Profile summary
Name: NFIX
Matrix ID: MA1528.2
Class: SMAD/NF-1 DNA-binding domain factors
Family: Nuclear factor 1
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 22456058
Uniprot ID: Q14938  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 4530 127 0 0 1819 7104 3125 3061 3423 1773 0 0 0 17346 ]
C [ 3912 231 0 0 17346 1890 5920 4769 2529 2300 0 17346 17346 1856 ]
G [ 3397 2386 17346 17346 0 5090 3846 5991 7942 1423 17346 0 0 63 ]
T [ 17346 17346 0 0 175 3262 4455 3525 3453 17346 459 0 0 314 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1528.1 MA1528 1 NFIX Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
MA1528.2 MA1528 2 NFIX Homo sapiens
Nuclear factor 1 SMAD/NF-1 DNA-binding domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Symbol:

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