Detailed information of matrix profile MA1663.2

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Profile summary
Name: NAC050
Matrix ID: MA1663.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 26617990
Uniprot ID: Q9SQX9  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1480 1243 386 114 284 2727 34 52 25 130 967 1196 1123 ]
C [ 742 556 280 27 43 238 4171 38 14 118 1097 729 869 ]
G [ 731 1162 3192 40 157 316 23 144 22 3913 778 1204 1036 ]
T [ 1316 1308 411 4088 3785 988 41 4035 4208 108 1427 1140 1241 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1663.1 MA1663 1 NAC050 Arabidopsis thaliana
NAC GCM domain factors
MA1663.2 MA1663 2 NAC050 Arabidopsis thaliana
NAC GCM domain factors
MA1663.3 MA1663 3 NAC050 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 3021.3

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: