Detailed information of matrix profile MA1663.2

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Profile summary
Name: NAC050
Matrix ID: MA1663.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 26617990
Uniprot ID: Q9SQX9  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1241 1140 1427 108 4208 4035 41 988 3785 4088 411 1308 1316 ]
C [ 1036 1204 778 3913 22 144 23 316 157 40 3192 1162 731 ]
G [ 869 729 1097 118 14 38 4171 238 43 27 280 556 742 ]
T [ 1123 1196 967 130 25 52 34 2727 284 114 386 1243 1480 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1663.1 MA1663 1 NAC050 Arabidopsis thaliana
NAC GCM domain factors
MA1663.2 MA1663 2 NAC050 Arabidopsis thaliana
NAC GCM domain factors
MA1663.3 MA1663 3 NAC050 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 3021.3

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: