Detailed information of matrix profile MA1665.2

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Profile summary
Name: HSFB2A
Matrix ID: MA1665.2
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24477691 24477691
Uniprot ID: Q9SCW4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 206 179 374 9 878 871 46 96 22 12 7 59 431 228 ]
C [ 292 171 77 4 2 1 32 264 2 2 858 261 82 131 ]
G [ 154 84 390 866 2 2 713 433 4 2 7 82 181 309 ]
T [ 235 453 46 8 5 13 96 94 859 871 15 485 193 219 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1665.1 MA1665 1 HSFB2A Arabidopsis thaliana
Heat shock factors
MA1665.2 MA1665 2 HSFB2A Arabidopsis thaliana
Heat shock factors
MA1665.3 MA1665 3 HSFB2A Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 763.084

TFFM details

TFFM ID: TFFM0901.1

ChIP-seq Centrality
-log(P-value): 936.752

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0901.1

ChIP-seq Centrality
-log(P-value): 973.983

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: