Detailed information of matrix profile MA1666.2

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Profile summary
Name: HSFB2B
Matrix ID: MA1666.2
Class: Heat shock factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9T0D3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 278 277 543 8 1262 1257 77 155 43 28 10 35 736 236 762 580 ]
C [ 516 243 151 11 5 5 53 352 4 7 1264 195 144 164 104 186 ]
G [ 236 147 529 1274 8 7 1032 655 6 8 9 83 209 688 174 249 ]
T [ 270 633 77 7 25 31 138 138 1247 1257 17 987 211 212 260 285 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1666.1 MA1666 1 HSFB2B Arabidopsis thaliana
Heat shock factors
MA1666.2 MA1666 2 HSFB2B Arabidopsis thaliana
Heat shock factors
MA1666.3 MA1666 3 HSFB2B Arabidopsis thaliana
HSF Heat shock factors
     

-log(P-value) = 2099.38

TFFM details

TFFM ID: TFFM0902.1

ChIP-seq Centrality
-log(P-value): 3526.05

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0902.1

ChIP-seq Centrality
-log(P-value): 3573.89

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: