Detailed information of matrix profile MA1672.1

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Profile summary
Name: GBF2
Matrix ID: MA1672.1
Class: Basic leucine zipper factors (bZIP)
Family: Group G
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 25215497
Uniprot ID: P42775  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 2359 2392 877 359 1408 112 7491 221 356 197 954 2835 1840 ]
C [ 1488 1653 891 282 6028 7553 77 7275 221 145 3420 679 2262 ]
G [ 1516 1420 596 6254 153 83 127 107 7122 101 2988 2084 1574 ]
T [ 2559 2457 5558 1027 333 174 227 319 223 7479 560 2324 2246 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1672.1 MA1672 1 GBF2 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1672.2 MA1672 2 GBF2 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0668.1

ChIP-seq Centrality
-log(P-value): 5655.27

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0668.1

ChIP-seq Centrality
-log(P-value): 5689.45

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: