Detailed information of matrix profile MA1674.2

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Profile summary
Name: NAC017
Matrix ID: MA1674.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24045017 24045017
Uniprot ID: Q9XIC5  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 298 340 218 12 990 879 9 127 917 928 255 260 ]
C [ 237 235 116 957 1 92 4 72 24 4 275 284 ]
G [ 240 156 527 9 0 7 978 60 6 6 193 153 ]
T [ 222 266 136 19 6 19 6 738 50 59 274 300 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1674.1 MA1674 1 NAC017 Arabidopsis thaliana
NAC GCM domain factors
MA1674.2 MA1674 2 NAC017 Arabidopsis thaliana
NAC GCM domain factors
MA1674.3 MA1674 3 NAC017 Arabidopsis thaliana
NAC GCM domain factors
     

-log(P-value) = 1402.43

TFFM details

TFFM ID: TFFM0904.1

ChIP-seq Centrality
-log(P-value): 2022.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0904.1

ChIP-seq Centrality
-log(P-value): 2068.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: