Detailed information of matrix profile MA1725.1

  1. Home
  2. Matrix > MA1725.1

Profile summary
Name: ZNF189
Matrix ID: MA1725.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 27852650
Uniprot ID: O75820  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3137 5001 1112 1467 288 318 389 336 160 194 237 4528 1938 ]
C [ 5788 4085 3088 735 15091 413 919 380 218 15342 15192 6205 3923 ]
G [ 3162 2742 2540 10201 271 414 14163 254 335 181 135 1165 3816 ]
T [ 3859 4118 9206 3543 296 14801 475 14976 15233 229 382 4048 6269 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1725.1 MA1725 1 ZNF189 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1725.2 MA1725 2 ZNF189 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0918.1

ChIP-seq Centrality
-log(P-value): 1760.15

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0918.1

ChIP-seq Centrality
-log(P-value): 1221.47

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: