Detailed information of matrix profile MA1734.1

  1. Home
  2. Matrix > MA1734.1

Profile summary
Name: AT1G19040
Matrix ID: MA1734.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 20935069
Uniprot ID: A0JQ66  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 0 21 188 239 133 148 167 0 1000 776 2 59 291 647 ]
C [ 1000 0 0 33 344 127 513 418 351 948 0 224 0 272 146 12 ]
G [ 0 139 0 919 208 317 177 93 286 14 0 0 993 79 5 0 ]
T [ 0 861 1000 28 260 317 177 341 196 38 0 0 5 590 558 341 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1734.1 MA1734 1 AT1G19040 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: