Detailed information of matrix profile MA1756.1

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Profile summary
Name: GRF9
Matrix ID: MA1756.1
Class: CH3
Family: GRF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22942381
Uniprot ID: Q8S9M3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 163 33 0 0 0 967 0 761 478 337 457 130 370 239 478 ]
C [ 130 109 0 0 902 33 0 33 163 130 163 250 163 413 217 ]
G [ 185 43 1000 0 0 0 1000 98 207 304 120 239 130 239 120 ]
T [ 522 815 0 1000 98 0 0 109 152 228 261 380 337 109 185 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1756.1 MA1756 1 GRF9 Arabidopsis thaliana
GRF CH3
MA1756.2 MA1756 2 GRF9 Arabidopsis thaliana
GRF C3H zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: