Detailed information of matrix profile MA1787.1

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Profile summary
Name: NAC047
Matrix ID: MA1787.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q84TD6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 257 278 262 260 552 7 1000 0 2 42 522 652 48 67 195 ]
C [ 127 202 258 207 88 708 0 995 10 230 367 0 640 285 137 ]
G [ 70 148 170 165 122 33 0 0 980 152 5 0 97 45 167 ]
T [ 547 372 310 368 238 252 0 5 8 577 107 348 215 603 502 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1787.1 MA1787 1 NAC047 Arabidopsis thaliana
NAC GCM domain factors
MA1787.2 MA1787 2 NAC047 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: