Detailed information of matrix profile MA1789.1

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Profile summary
Name: NAC071
Matrix ID: MA1789.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: O49697  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 5 0 0 45 414 229 184 116 150 29 1000 633 2 89 707 ]
C [ 995 3 3 508 133 227 380 310 190 741 0 367 0 340 84 ]
G [ 0 135 0 338 103 126 135 125 123 146 0 0 968 66 0 ]
T [ 0 862 997 108 350 418 301 449 537 84 0 0 30 505 209 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1789.1 MA1789 1 NAC071 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: