Detailed information of matrix profile MA1794.1

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Profile summary
Name: NLP7
Matrix ID: MA1794.1
Class: RWP-RK
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 23511481
Uniprot ID: Q84TH9  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 447 341 299 10 66 329 0 0 18 10 39 99 400 306 346 ]
C [ 109 129 89 182 0 175 1000 444 390 81 15 472 113 123 123 ]
G [ 118 165 183 2 934 339 0 40 22 0 0 323 415 351 281 ]
T [ 326 365 429 807 0 156 0 516 570 909 946 106 72 220 250 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1794.1 MA1794 1 NLP7 Arabidopsis thaliana
RWP-RK
MA1794.2 MA1794 2 NLP7 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: