Detailed information of matrix profile MA1799.1

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Profile summary
Name: SPL10
Matrix ID: MA1799.1
Class: C2H2 zinc finger factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 16554053
Uniprot ID: Q8S9L0  
Source: 25220462
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 300 197 34 1 957 10 58 337 490 299 ]
C [ 233 261 0 5 42 971 44 23 163 323 ]
G [ 164 149 962 14 0 9 744 596 101 166 ]
T [ 303 393 3 980 0 10 153 44 246 213 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1799.1 MA1799 1 SPL10 Arabidopsis thaliana
SBP C2H2 zinc finger factors
MA1799.2 MA1799 2 SPL10 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: