Detailed information of matrix profile MA1807.1

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Profile summary
Name: ZHD10
Matrix ID: MA1807.1
Class: Homeo domain factors
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21059647
Uniprot ID: Q9FIW9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 255 307 0 828 1000 0 0 1000 628 92 225 ]
C [ 296 64 28 0 0 0 0 0 0 172 160 ]
G [ 160 167 0 172 0 0 0 0 372 138 245 ]
T [ 289 463 972 0 0 1000 1000 0 0 598 371 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1807.1 MA1807 1 ZHD10 Arabidopsis thaliana
PLINC Homeo domain factors
MA1807.2 MA1807 2 ZHD10 Arabidopsis thaliana
PLINC Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: