Detailed information of matrix profile MA1938.2

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Profile summary
Name: ERF::NHLH1
Matrix ID: MA1938.2
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::Tal-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9488464
Uniprot ID: P50548   Q02575  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 156 0 5 324 1 26 10 1 0 12 27 4 324 241 113 0 ]
C [ 81 14 317 0 11 301 20 12 316 327 0 10 21 0 3 108 ]
G [ 81 290 14 0 288 2 13 317 6 11 325 313 3 11 176 16 ]
T [ 7 21 18 0 28 8 324 15 8 1 7 26 12 84 40 210 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1938.1 MA1938 1 ERF::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
MA1938.2 MA1938 2 ERF::NHLH1 Homo sapiens
Ets-related::Tal-related Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: