Detailed information of matrix profile MA1990.1

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Profile summary
Name: Gli1
Matrix ID: MA1990.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 25476449
Uniprot ID: P47806  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1021 1057 2124 113 3120 100 71 3653 38 559 153 3312 588 1091 ]
C [ 1170 1093 299 193 331 3744 3809 73 3827 3231 3566 188 1438 896 ]
G [ 943 1115 1104 3535 498 88 74 87 75 145 110 251 1534 1401 ]
T [ 869 738 476 162 54 71 49 190 63 68 174 252 443 615 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1990.1 MA1990 1 Gli1 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA1990.2 MA1990 2 Gli1 Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0957.1

ChIP-seq Centrality
-log(P-value): 667.189

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0957.1

ChIP-seq Centrality
-log(P-value): 655.376

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: