Detailed information of matrix profile MA2022.1

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Profile summary
Name: LOB
Matrix ID: MA2022.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 17913740
Uniprot ID: Q9FML4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 65 116 92 7 28 39 4 39 37 14 250 129 73 147 170 96 159 ]
C [ 553 569 18 760 739 4 768 721 1 693 398 33 538 331 74 463 382 ]
G [ 74 24 552 10 4 729 7 8 733 38 44 532 71 56 373 96 87 ]
T [ 103 86 133 18 24 23 16 27 24 50 103 101 113 261 178 140 167 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2022.1 MA2022 1 LOB Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
MA2022.2 MA2022 2 LOB Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     

-log(P-value) = 112.37

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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