Detailed information of matrix profile MA2029.1

  1. Home
  2. Matrix > MA2029.1

Profile summary
Name: MYB88
Matrix ID: MA2029.1
Class: Tryptophan cluster factors
Family: Myb
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26484765
Uniprot ID: F4IRB4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 60 33 150 3 1 0 1 1 0 18 7 38 49 ]
C [ 54 68 15 159 1 167 1 165 152 6 138 72 42 ]
G [ 16 36 3 6 165 1 27 2 3 3 6 21 37 ]
T [ 38 31 0 0 1 0 139 0 13 141 17 37 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2029.1 MA2029 1 MYB88 Arabidopsis thaliana
Myb Tryptophan cluster factors
MA2029.2 MA2029 2 MYB88 Arabidopsis thaliana
MYB Tryptophan cluster factors
     

-log(P-value) = 139.442

TFFM details

TFFM ID: TFFM0983.1

ChIP-seq Centrality
-log(P-value): 267.366

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0983.1

ChIP-seq Centrality
-log(P-value): 302.803

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: