Detailed information of matrix profile MA2032.1

  1. Home
  2. Matrix > MA2032.1

Profile summary
Name: TRB1
Matrix ID: MA2032.1
Class: Tryptophan cluster factors
Family: Myb-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 26597966
Uniprot ID: Q8VWK4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1648 2956 4615 4355 138 86 71 108 4824 2829 1714 ]
C [ 1082 451 128 40 4706 4755 4767 44 34 372 1073 ]
G [ 1087 682 96 443 35 36 55 57 44 1303 474 ]
T [ 1126 854 104 105 64 66 50 4734 41 439 1682 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2032.1 MA2032 1 TRB1 Arabidopsis thaliana
Myb-related Tryptophan cluster factors
MA2032.2 MA2032 2 TRB1 Arabidopsis thaliana
MYB-related Tryptophan cluster factors
     

-log(P-value) = 1549.28

TFFM details

TFFM ID: TFFM0985.1

ChIP-seq Centrality
-log(P-value): 6066.69

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0985.1

ChIP-seq Centrality
-log(P-value): 5979.36

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: