Detailed information of matrix profile MA2039.1

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Profile summary
Name: ASIL2
Matrix ID: MA2039.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497
Uniprot ID: Q9LJG8  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 480 297 33 74 12 6 14 63 25 83 853 393 393 ]
C [ 168 210 1089 10 1367 1391 2 61 1233 59 144 419 188 ]
G [ 281 210 33 147 14 0 1382 1244 7 1217 228 252 449 ]
T [ 470 682 244 1168 6 2 1 31 134 40 174 335 369 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2039.1 MA2039 1 ASIL2 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
MA2039.2 MA2039 2 ASIL2 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0986.1

ChIP-seq Centrality
-log(P-value): 463.064

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0986.1

ChIP-seq Centrality
-log(P-value): 459.751

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: