Detailed information of matrix profile MA2046.1

  1. Home
  2. Matrix > MA2046.1

Profile summary
Name: NAC035
Matrix ID: MA2046.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 22345491
Uniprot ID: Q9ZVP8  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 230 191 329 431 41 800 43 10 41 45 755 235 181 195 ]
C [ 184 187 143 109 632 4 736 8 29 720 4 253 274 133 ]
G [ 148 185 156 112 36 3 24 787 649 7 29 104 112 226 ]
T [ 251 250 185 161 104 6 10 8 94 41 25 221 246 259 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2046.1 MA2046 1 NAC035 Arabidopsis thaliana
NAC GCM domain factors
MA2046.2 MA2046 2 NAC035 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0992.1

ChIP-seq Centrality
-log(P-value): 1909.04

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0992.1

ChIP-seq Centrality
-log(P-value): 1923.29

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: