Detailed information of matrix profile MA2048.1

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Profile summary
Name: NAC045
Matrix ID: MA2048.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054
Uniprot ID: A4VCM0  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 446 531 112 1389 1327 23 84 1328 1352 148 287 364 444 ]
C [ 353 193 367 4 52 11 1158 17 3 917 695 238 330 ]
G [ 263 304 814 5 16 1354 41 11 10 142 172 263 250 ]
T [ 342 376 111 6 9 16 121 48 39 197 250 539 380 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2048.1 MA2048 1 NAC045 Arabidopsis thaliana
NAC GCM domain factors
MA2048.2 MA2048 2 NAC045 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0994.1

ChIP-seq Centrality
-log(P-value): 3083.08

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0994.1

ChIP-seq Centrality
-log(P-value): 2929.37

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: