Detailed information of matrix profile MA2052.1

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Profile summary
Name: ZAT6
Matrix ID: MA2052.1
Class: C2H2 zinc finger factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24834923
Uniprot ID: O22533  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2817 2604 7234 7675 210 342 8264 290 214 1185 3267 2603 ]
C [ 1418 1840 393 170 82 40 56 37 77 410 1175 1165 ]
G [ 1391 1459 310 164 45 7885 82 173 213 5912 1824 1611 ]
T [ 2958 2681 647 575 8247 317 182 8084 8080 1077 2318 3205 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2052.1 MA2052 1 ZAT6 Arabidopsis thaliana
C2H2 zinc finger factors
MA2052.2 MA2052 2 ZAT6 Arabidopsis thaliana
C2H2 C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0998.1

ChIP-seq Centrality
-log(P-value): 2350.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0998.1

ChIP-seq Centrality
-log(P-value): 2218.86

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: