Detailed information of matrix profile MA2111.1

Profile summary

Name: HNF4
Matrix ID: MA2111.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 12743820
Uniprot ID: Q4H3D5  
Source: 31267468
Comment: Similar motif from profile inference.

Sequence logo

Frequency matrix

A [ 167 23 15 214 811 8 9 24 32 59 358 454 56 53 ]
C [ 81 117 8 19 167 976 58 58 39 57 126 374 796 454 ]
G [ 192 18 959 740 12 7 10 25 29 815 384 81 66 62 ]
T [ 561 842 19 26 11 9 923 893 899 69 131 90 82 432 ]

Binding sites information

No Binding sites available for this model.

External links