Detailed information of matrix profile MA2348.1

  1. Home
  2. Matrix > MA2348.1

Profile summary
Name: IDD6
Matrix ID: MA2348.1
Class: C2H2 zinc finger factors
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8RWX7  
Source: 27203113
Comment: Also known as BLJ

Sequence logo

Frequency matrix

         
A [ 239 103 0 0 0 0 0 8 53 8 28 144 268 86 16 157 ]
C [ 95 61 24 8 24 4 8 979 86 37 132 0 20 367 272 61 ]
G [ 115 45 20 0 4 991 61 0 636 57 53 24 4 446 16 483 ]
T [ 549 789 954 991 971 4 929 12 223 896 785 830 706 99 694 297 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2348.1 MA2348 1 IDD6 Arabidopsis thaliana
IDD C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: