Detailed information of matrix profile UN0094.2

  1. Home
  2. Matrix > UN0094.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: NCU06487
Matrix ID: UN0094.2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Fungi
Species: Neurospora crassa
Data Type: PBM
Validation:
Uniprot ID: Q7RYI7  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 659 38 1 3 6 12 ]
C [ 250 13 992 992 80 960 ]
G [ 14 920 0 4 561 0 ]
T [ 75 27 6 0 351 26 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0094.1 UN0094 1 NCU06487 Neurospora crassa
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0094.2 UN0094 2 NCU06487 Neurospora crassa
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: