Detailed information of matrix profile UN0452.1

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Profile summary

Name: Glis
Matrix ID: UN0452.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 272 273 289 295 296 290 269 161 562 92 42 50 20 45 72 223 180 269 289 285 237 258 ]
C [ 336 338 325 318 307 301 295 210 261 834 923 906 965 937 821 464 468 326 288 298 301 327 ]
G [ 193 189 187 184 183 186 207 463 123 43 20 9 7 8 36 197 209 270 262 247 294 221 ]
T [ 200 200 199 203 214 222 229 166 55 31 14 34 8 11 71 116 144 136 161 171 168 194 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0452.1 UN0452 1 Glis Ciona intestinalis
More than 3 adjacent zinc fingers C2H2 zinc finger factors
UN0452.2 UN0452 2 Glis Ciona intestinalis
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: