Detailed information of matrix profile UN0546.2

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Profile summary

Name: GCM1::HOXB13
Matrix ID: UN0546.2
Class: GCM domain factors::Homeo domain factors
Family: GCM::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q92826   Q9NP62  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 0 4 29 60 0 117 0 2 76 117 0 117 117 117 ]
C [ 117 117 117 66 117 22 78 99 41 0 0 9 1 45 ]
G [ 3 2 0 117 9 17 24 5 10 22 2 8 10 6 ]
T [ 0 0 23 9 21 4 18 10 36 0 117 36 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0546.1 UN0546 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0547.1 UN0547 1 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0546.2 UN0546 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0547.2 UN0547 2 GCM1::HOXB13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: