Detailed information of matrix profile UN0553.1

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Profile summary

Name: GCM2::HOXA13
Matrix ID: UN0553.1
Class: GCM domain factors::Homeo domain factors
Family: GCM::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O75603   P31271  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 5476 215 1924 973 157 0 0 84 6107 7063 279 6742 7045 6817 3604 ]
C [ 695 122 92 5940 37 0 0 782 1975 356 366 345 297 624 1656 ]
G [ 1108 72 5208 798 7104 7191 7186 140 190 471 584 953 356 648 989 ]
T [ 191 7121 39 653 60 0 0 6984 837 629 7103 1602 835 726 936 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0553.1 UN0553 1 GCM2::HOXA13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
UN0553.2 UN0553 2 GCM2::HOXA13 Homo sapiens
GCM::HOX GCM domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: