Detailed information of matrix profile UN0869.1

  1. Home
  2. Matrix > UN0869.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: LBD19
Matrix ID: UN0869.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: O22132  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 25 18 113 75 723 791 903 666 143 175 178 0 11 ]
C [ 745 976 78 116 5 0 8 28 231 658 626 0 233 ]
G [ 215 5 626 630 215 131 43 18 71 115 43 991 716 ]
T [ 15 0 181 178 56 76 45 286 553 51 151 8 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0869.1 UN0869 1 LBD19 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: