Detailed information of matrix profile UN0870.1

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Profile summary

Name: LBD2
Matrix ID: UN0870.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LNB9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 102 47 15 742 397 530 720 452 413 195 78 0 40 522 242 ]
C [ 483 947 0 18 197 67 25 83 123 147 907 0 168 245 82 ]
G [ 338 3 925 162 170 308 88 85 225 168 0 1000 720 75 538 ]
T [ 77 3 60 78 237 95 167 380 238 490 15 0 72 158 138 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0870.1 UN0870 1 LBD2 Arabidopsis thaliana
LBD Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: