Detailed information of matrix profile MA1270.2

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Profile summary
Name: DOF3.2
Matrix ID: MA1270.2
Class: Other C4 zinc finger-type factors
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9M1E6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 75 177 319 0 0 0 0 135 39 129 129 87 83 89 104 126 ]
C [ 151 111 138 600 0 0 0 0 55 175 211 189 98 55 120 92 ]
G [ 51 27 85 0 0 1 0 0 10 176 107 57 56 59 48 55 ]
T [ 323 285 58 0 600 599 600 465 496 120 153 267 363 397 328 327 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1270.1 MA1270 1 DOF3.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
MA1270.2 MA1270 2 DOF3.2 Arabidopsis thaliana
DOF Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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